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Connection Timelines

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Measuring data reuse and metadata re-curation in multiple repositories is important for understanding repository behavior and finding examples of different behaviors. Comparing connected article and dataset publication dates may provides useful measures and visualizations of these data and repository behaviors..

First, we need a set of connections for analysis. Connections have three parts: 1) datasets with DOIs, 2) articles with DOIs, and 3) Links. We are getting these data from CHORUS which retrieves them from several elements of the global research infrastructure.

Argo Float Data

The Argo Float Dataset is a very well connected dataset and provides an example that demonstrates connection timiming . The DOI (10.17882/42182) was cited by over 300 articles between 2012 and 2023.

This Figure shows the temporal relationships between the publication dates for the dataset and these articles. The x-axis shows the creation year of the data DOI, 2016 in this case. The y-axis shows the publication year of the articles and the number of articles / year is shown as bubble size and as text beside the bubbles with the y-axis from 2011 to 2023.

The second y-axis, on the right side of the plot, shows the difference between the article and dataset publication years. It is zero at the year the data DOI was created (2016).

Curation

Creation of the dataset and article DOIs during the same year is termed curation, metadata creation while the dataset is being created.

20 papers (6%) that referenced the Argo Data were published during 2016, the same year as the dataset DOI was created, i.e., the publication year difference is 0.

The gallery below shows four repositories where data and articles have the same publication dates. These are termed curators.

Table 1. Examples of Curators.

Cambridge Crystallographic Data Centre

The Royal Society

Optica Publishing Group

Figshare

NSF-20231211-Timeline-Cambridge_Crystallographic_Data_Centre.png
NSF-20231211-Timeline-The_Royal_Society.png
NSF-20231211-Timeline-Optica_Publishing_Group.png
NSF-20231211-Timeline-Figshare.png
NSF-20231211-Timeline-Cambridge_Crystallographic_Data_Centre.png NSF-20231211-Timeline-The_Royal_Society.png NSF-20231211-Timeline-Optica_Publishing_Group.png NSF-20231211-Timeline-Figshare.png

this is text

Reuse

Data reuse happens when papers are published after the data, i.e., publishing a paper and connecting it to the data after the data has a DOI.

258 papers (82%) that referenced the Argo Data were published after the DOI was published during 2016, i.e. with positive year differences.

The gallery below shows four repositories with significant data reuse.

Table 2. Examples of Reuse.

NOAA National Centers for Environmental Information

UNAVCO, Inc.

NASA EOSDIS Land Processes Distributed Active Archive Center

UCAR NCAR - Research Data Archive

NSF-20231211-Timeline-UCAR_NCAR_-_Research_Data_Archive.png
NSF-20231211-Timeline-NOAA_National_Centers_for_Environmental_Information.png
NSF-20231211-Timeline-UNAVCO,_Inc..png
NSF-20231211-Timeline-NASA_EOSDIS_Land_Processes_Distributed_Active_Archive_Center.png
NSF-20231211-Timeline-UCAR_NCAR_-_Research_Data_Archive.png NSF-20231211-Timeline-NOAA_National_Centers_for_Environmental_Information.png NSF-20231211-Timeline-UNAVCO,_Inc..png NSF-20231211-Timeline-NASA_EOSDIS_Land_Processes_Distributed_Active_Archive_Center.png

Re-Curation

Re-curation of the article or dataset metadata, i.e., creating a connection by adding a link to the dataset or article metadata, mostly happens when a dataset is created after an article is published.

37 papers (12%) that referenced the Argo Data were published before 2016, i.e. with negative year differences.

Table 3. Examples of Re-Curation.

The University of British Columbia

BindingDB

Biological and Chemical Oceanography Data Management Office (BCO-DMO)

Borealis

NSF-20231211-Timeline-The_University_of_British_Columbia.png
NSF-20231211-Timeline-Biological_and_Chemical_Oceanography_Data_Management_Office_(BCO-DMO).png
NSF-20231211-Timeline-Borealis.png
NSF-20231211-Timeline-BindingDB.png
NSF-20231211-Timeline-The_University_of_British_Columbia.png NSF-20231211-Timeline-Biological_and_Chemical_Oceanography_Data_Management_Office_(BCO-DMO).png NSF-20231211-Timeline-Borealis.png NSF-20231211-Timeline-BindingDB.png

Other Repositories With Data From Articles Funded by NSF.

The gallery below shows connection timelines for repositories holding datasets that are connected to articles that acknowledge funding by NSF. The articles are selected using this criteria (funder = U.S. National Science Foundation or funderId = 10.13039/100000001) and links to datasets are identified using Scholexplorer. They provide a limited view that may not be representative of the entire repository. Data retrieval and processing are described here.

Table 4. Other Repositories With Data From NSF Funded Articles.

Arctic Data Center

Biological Magnetic Resonance Bank

CaltechDATA

Centre de Donnees Strasbourg (CDS)

Code Ocean

CyVerse Data Commons

Dryad

Data Repository for the University of Minnesota (DRUM)

Earth System Grid Federation

Environmental Data Initiative

GFZ Data Services

GigaScience Database

Harte Research Institute

Harvard Dataverse

HEPData

KNB Data Repository

NASA Goddard Earth Sciences Data and Information Services Center

SEANOE

NASA National Snow and Ice Data Center Distributed Active Archive Center

National Geophysical Data Center, NOAA

UCAR NCAR - Earth Observing Laboratory

Taylor & Francis

UC San Diego Library Digital Collections

University of Illinois at Urbana-Champaign

University of Michigan

U.S. Geological Survey

U.S. EPA Office of Research and Development (ORD)

Wiley

U.S. Antarctic Program (USAP) Data Center

Zenodo

NSF-20231211-Timeline-Apollo_-_University_of_Cambridge_Repository.png
NSF-20231211-Timeline-Arctic_Data_Center.png
NSF-20231211-Timeline-Biological_Magnetic_Resonance_Bank.png
NSF-20231211-Timeline-CaltechDATA.png
NSF-20231211-Timeline-Centre_de_Donnees_Strasbourg_(CDS).png
NSF-20231211-Timeline-Code_Ocean.png
NSF-20231211-Timeline-Zenodo.png
NSF-20231211-Timeline-University_of_Michigan.png
NSF-20231211-Timeline-University_of_Illinois_at_Urbana-Champaign.png
NSF-20231211-Timeline-UCAR_NCAR_-_Earth_Observing_Laboratory.png
NSF-20231211-Timeline-UC_San_Diego_Library_Digital_Collections.png
NSF-20231211-Timeline-U.S._Geological_Survey.png
NSF-20231211-Timeline-U.S._EPA_Office_of_Research_and_Development_(ORD).png
NSF-20231211-Timeline-U.S._Antarctic_Program_(USAP)_Data_Center.png
NSF-20231211-Timeline-The_Global_Biodiversity_Information_Facility.png
NSF-20231211-Timeline-CyVerse_Data_Commons.png
NSF-20231211-Timeline-Data_Repository_for_the_University_of_Minnesota_(DRUM).png
NSF-20231211-Timeline-Dryad.png
NSF-20231211-Timeline-Geochemistry,_Geophysics,_Geosystems.png
NSF-20231211-Timeline-Earth_System_Grid_Federation.png
NSF-20231211-Timeline-Geophysical_Research_Letters.png
NSF-20231211-Timeline-Environmental_Data_Initiative.png
NSF-20231211-Timeline-GFZ_Data_Services.png
NSF-20231211-Timeline-GigaScience_Database.png
NSF-20231211-Timeline-Interdisciplinary_Earth_Data_Alliance_(IEDA).png
NSF-20231211-Timeline-Harte_Research_Institute.png
NSF-20231211-Timeline-KNB_Data_Repository.png
NSF-20231211-Timeline-Harvard_Dataverse.png
NSF-20231211-Timeline-NASA_Goddard_Earth_Sciences_Data_and_Information_Services_Center.png
NSF-20231211-Timeline-HEPData.png
NSF-20231211-Timeline-NASA_National_Snow_and_Ice_Data_Center_Distributed_Active_Archive_Center.png
NSF-20231211-Timeline-National_Geophysical_Data_Center,_NOAA.png
NSF-20231211-Timeline-SEANOE.png
NSF-20231211-Timeline-Taylor_&_Francis.png
NSF-20231211-Timeline-Wiley.png
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NSF-20231211-Timeline-Apollo_-_University_of_Cambridge_Repository.png
NSF-20231211-Timeline-Arctic_Data_Center.png
NSF-20231211-Timeline-Biological_Magnetic_Resonance_Bank.png
NSF-20231211-Timeline-CaltechDATA.png
NSF-20231211-Timeline-Centre_de_Donnees_Strasbourg_(CDS).png
NSF-20231211-Timeline-Code_Ocean.png
NSF-20231211-Timeline-Zenodo.png
NSF-20231211-Timeline-University_of_Michigan.png
NSF-20231211-Timeline-University_of_Illinois_at_Urbana-Champaign.png
NSF-20231211-Timeline-UCAR_NCAR_-_Earth_Observing_Laboratory.png
NSF-20231211-Timeline-UC_San_Diego_Library_Digital_Collections.png
NSF-20231211-Timeline-U.S._Geological_Survey.png
NSF-20231211-Timeline-U.S._EPA_Office_of_Research_and_Development_(ORD).png
NSF-20231211-Timeline-U.S._Antarctic_Program_(USAP)_Data_Center.png
NSF-20231211-Timeline-The_Global_Biodiversity_Information_Facility.png
NSF-20231211-Timeline-CyVerse_Data_Commons.png
NSF-20231211-Timeline-Data_Repository_for_the_University_of_Minnesota_(DRUM).png
NSF-20231211-Timeline-Dryad.png
NSF-20231211-Timeline-Geochemistry,_Geophysics,_Geosystems.png
NSF-20231211-Timeline-Earth_System_Grid_Federation.png
NSF-20231211-Timeline-Geophysical_Research_Letters.png
NSF-20231211-Timeline-Environmental_Data_Initiative.png
NSF-20231211-Timeline-GFZ_Data_Services.png
NSF-20231211-Timeline-GigaScience_Database.png
NSF-20231211-Timeline-Interdisciplinary_Earth_Data_Alliance_(IEDA).png
NSF-20231211-Timeline-Harte_Research_Institute.png
NSF-20231211-Timeline-KNB_Data_Repository.png
NSF-20231211-Timeline-Harvard_Dataverse.png
NSF-20231211-Timeline-NASA_Goddard_Earth_Sciences_Data_and_Information_Services_Center.png
NSF-20231211-Timeline-HEPData.png
NSF-20231211-Timeline-NASA_National_Snow_and_Ice_Data_Center_Distributed_Active_Archive_Center.png
NSF-20231211-Timeline-National_Geophysical_Data_Center,_NOAA.png
NSF-20231211-Timeline-SEANOE.png
NSF-20231211-Timeline-Taylor_&_Francis.png
NSF-20231211-Timeline-Wiley.png

Data From Papers Funded by the U.S. Geological Survey.

CHORUS provides reports for many U.S. Funders. The timelines above are for datasets connected to papers funded by the U.S. National Science Foundation. Those shown below were funded by the U.S. Geological Survey.

Table 5. Repositories of Data From USGS Funded Articles.

Cambridge Crystallographic Data Centre

Dryad

Environmental Data Initiative

Geophysical Research Letters

Interdisciplinary Earth Data Alliance (IEDA)

Mendeley

PANGAEA - Data Publisher for Earth & Environmental ScienceThe Global Biodiversity Information Facility

The Royal Society

U.S. EPA Office of Research and Development (ORD)

U.S. Geological Survey

USGS-20231211-Timeline-All.png
USGS-20231211-Timeline-Cambridge_Crystallographic_Data_Centre.png
USGS-20231211-Timeline-Dryad.png
USGS-20231211-Timeline-Environmental_Data_Initiative.png
USGS-20231211-Timeline-Geophysical_Research_Letters.png
USGS-20231211-Timeline-Interdisciplinary_Earth_Data_Alliance_(IEDA).png
USGS-20231211-Timeline-Mendeley.png
USGS-20231211-Timeline-PANGAEA_-_Data_Publisher_for_Earth_&_Environmental_Science.png
USGS-20231211-Timeline-The_Global_Biodiversity_Information_Facility.png
USGS-20231211-Timeline-The_Royal_Society.png
USGS-20231211-Timeline-U.S._EPA_Office_of_Research_and_Development_(ORD).png
USGS-20231211-Timeline-U.S._Geological_Survey.png
USGS-20231211-Timeline-All.png USGS-20231211-Timeline-Cambridge_Crystallographic_Data_Centre.png USGS-20231211-Timeline-Dryad.png USGS-20231211-Timeline-Environmental_Data_Initiative.png USGS-20231211-Timeline-Geophysical_Research_Letters.png USGS-20231211-Timeline-Interdisciplinary_Earth_Data_Alliance_(IEDA).png USGS-20231211-Timeline-Mendeley.png USGS-20231211-Timeline-PANGAEA_-_Data_Publisher_for_Earth_&_Environmental_Science.png USGS-20231211-Timeline-The_Global_Biodiversity_Information_Facility.png USGS-20231211-Timeline-The_Royal_Society.png USGS-20231211-Timeline-U.S._EPA_Office_of_Research_and_Development_(ORD).png USGS-20231211-Timeline-U.S._Geological_Survey.png
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Metadata Game Changers

I have worked in scientific data management for many years and enjoy working with organizations and communities that share data and knowledge. I am fluent in metadata standards and dialects used in scientific data management and publishing.

Tell us what you think!

We are constantly working to help you change your metadata game. If you have any questions, suggestions, or crazy ideas, please send contact us or connect with us through the details below.

Ted Habermann
ted@metadatagamechangers.com
ORCID | LinkedIn | Twitter

Erin Robinson
erin@metadatagamechangers.com
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